Insertion junction: CLIP2.010335_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010335
Chromosome:chromosome 15
Location:1620673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750547 NDA2 thylakoid NADH dehydrogenase; (1 of 3) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGGAGCAGTTCAAGGACATTCTTGGCAAGGTGGACAAGGGTGAGCGA
Internal bar code:AAAGGTTCGTGGGAATAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTGTGGTGTGGGATGT
Suggested primer 2:CACCTCCATCTCATCGCTCC