Insertion junction: CLIP2.010357_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010357
Chromosome:chromosome 2
Location:4875276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109650 GSP1 Gamete-specific plus 1; (1 of 2) IPR001356//IPR008422//IPR009057 - Homeobox domain // Homeobox KN domain // Homeodomain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGTATACACAATGATCTATTTTTGCCAGTGTCTGTATTACTGTATGCG
Internal bar code:GGAGCCGTCAAGGGACCTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4471
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGACACGTTCAGATGGGA
Suggested primer 2:GCGGAGGCGTATTCCCATAA