Insertion junction: CLIP2.010361_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010361
Chromosome:chromosome 2
Location:8364435
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142700 (1 of 41) PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCGCCAGTGCCGCCGCCAGCCCTGTCGGCCCTGTCGGCCGCGGCGC
Internal bar code:TTCGAGAACTTAAGGGAGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1036
LEAP-Seq percent confirming:47.5
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGACCTGAGGAGATGGA
Suggested primer 2:TGTTTTCAGGGGTGCGCTAT