Insertion junction: CLIP2.010371_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010371
Chromosome:chromosome 16
Location:2652539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661450 HTV3 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGCTTTGCAACAGGGATTCCAAACGCACATGCCCAATGACTCTCCT
Internal bar code:TTCGTGGGGGGATGAGTTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGACAACGGTCTGAGCAGTC
Suggested primer 2:CAGGGTACGAGTTGTTGGCT