Insertion junction: CLIP2.010371_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010371
Chromosome:chromosome 16
Location:2652551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661450 HTV3 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAAGCACTGCTACTCCGGCATGCGCAGGGGCATGCGCGGAGCTCACTC
Internal bar code:GTTGCCGTTACCGGCGGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTACGAGTTGTTGGCT
Suggested primer 2:TGACAACGGTCTGAGCAGTC