Insertion junction: CLIP2.010372_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010372
Chromosome:chromosome 3
Location:3226839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165250 (1 of 1) PF01248//PF12874 - Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) // Zinc-finger of C2H2 type (zf-met) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCAATTAAGCATGAATGTAACGCGCCCCCGCGCAGTCTGACCACTTC
Internal bar code:ACATTATGGAATTGTCTAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:164
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGGGATCTGAGTTGGG
Suggested primer 2:GGTCGAGGCGATGAAAGTGA