Insertion junction: CLIP2.010378_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010378
Chromosome:chromosome 2
Location:5213097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112250 CAL2 (1 of 1) 3.4.22.53//3.4.22.54 - Calpain-2 / Milli-calpain // Calpain-3 / Muscle-specific calcium-activated neutral protease 3; Calpain family cysteine protease 5'UTR/CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAACCAGCAACTGTTGCCAAGCGGGCGCTCGACTAACTCTGTTTTAGT
Internal bar code:CATTAGCAAGCGGATCACAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:26.087
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCCGATGCTATTTTGG
Suggested primer 2:GTTGGGTAGCGTCCTTGTGA