Insertion junction: CLIP2.010381_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010381
Chromosome:chromosome 8
Location:805149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360850 (1 of 1) K18798 - protein AFG1 (AFG1, LACE1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTCCTTTCCCGTTGCGATCTACCGTATTAAGACAAAGACCATACGGG
Internal bar code:TTCCATTATATCTTCAGGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1016
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AACACACACACGCTTGATGC
Suggested primer 2:AAAACACACACAGACGCACG