Insertion junction: CLIP2.010381_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010381
Chromosome:chromosome 8
Location:805158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360850 (1 of 1) K18798 - protein AFG1 (AFG1, LACE1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGACATTTGTATGCTCCTTCCCTTGTGCTCATTAAGTAGCAAGCTTCT
Internal bar code:TTCCATTATATCTTCAGGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1366
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACACACACAGACGCACG
Suggested primer 2:AACACACACACGCTTGATGC