Insertion junction: CLIP2.010388_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010388
Chromosome:chromosome 3
Location:5172181
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181200 (1 of 1) K01969 - 3-methylcrotonyl-CoA carboxylase beta subunit (E6.4.1.4B) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTCGTCCAGGCGGCTGCCGTCCAGCAGCCGGGCCAGCACGGCGCGCAC
Internal bar code:AATTTCGTGGACTAGCCGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2668
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAAGTGGGTGGTGGATGG
Suggested primer 2:GTCGTCCTCACTTGCAGGAA