Insertion junction: CLIP2.010390_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010390
Chromosome:chromosome 14
Location:2866053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627100 (1 of 274) IPR020683 - Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTCGGCCCACGACGACCGCCGCCGCCGCTGCGGCGCCACGGGCATCC
Internal bar code:GCGCTATGACACAGTGGAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTCCCGTTCCTTTCAGC
Suggested primer 2:TCTGAAGGCAAGCTACCTGC