Insertion junction: CLIP2.010397_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010397
Chromosome:chromosome 10
Location:3383131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443801 (1 of 3) PF13401 - AAA domain (AAA_22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGCGCATGGCGGTGCCTGGGCAATGCCGCGTGTGTATGTGCGACATG
Internal bar code:CAGAATATAGCCATGAGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1209
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCAAAGCATCGATCAGTG
Suggested primer 2:GCCTCCGCTATGTCTACACC