Insertion junction: CLIP2.010398_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010398
Chromosome:chromosome 2
Location:5563809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g115300 AOT6 Amino acid transporter; (1 of 1) PTHR22950:SF72 - SODIUM-COUPLED NEUTRAL AMINO ACID TRANSPORTER 6-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCGCTTCGGGCATTCACCGCGGCAATTCTTCGTCCTCTGTGCCGCA
Internal bar code:GGTGTATAGCTTAGAACTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3264
LEAP-Seq percent confirming:91.5663
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCAGTCAACGCTCAAC
Suggested primer 2:GTAATGGTGGGGAGGGGTTG