Insertion junction: CLIP2.010399_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010399
Chromosome:chromosome 9
Location:5576777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409650 (1 of 18) PF12906 - RING-variant domain (RINGv) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGTCTCACGAACCGCATGTTCGACGTAAATTTTGAGGTCAAGGTCA
Internal bar code:CTGAGAGGCTGGATTTATGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1442
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAAACGCGCGATCTGAC
Suggested primer 2:TGCATGGGAAAAGCGATCCT