Insertion junction: CLIP2.010403_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010403
Chromosome:chromosome 6
Location:5672326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287950 SRH13 (1 of 1) K10779//K10876 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) // RAD54-like protein 2 [EC:3.6.4.12] (RAD54L2); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCATTCTGTACAGGGCACGGACTGGGCCCGGGAAGGCCATTCAACCTG
Internal bar code:CTAGAACATAGGTTTGGGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:929
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAGCCAAGCAGGACCTCG
Suggested primer 2:CTCTGTGCGCTCATTCATGC