Insertion junction: CLIP2.010409_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010409
Chromosome:chromosome 2
Location:8101198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144251 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCTGCAAGGAGAAACTGGGTGGTCGCAGGCGTTGGGGCGCGCGGCAG
Internal bar code:TAAGAGACCCGGAATTTGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:76
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGTACCTGCCTACGCCT
Suggested primer 2:AGGGTGGGTTTGTTGCAGAA