Insertion junction: CLIP2.010412_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010412
Chromosome:chromosome 12
Location:3806896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514650 CNK6 (1 of 1) PF10498//PF14531 - Intra-flagellar transport protein 57 (IFT57) // Kinase-like (Kinase-like); NIMA-related kinase 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCGGCCAGCTGCTGCCGACTCGCCGACTGGCTTGTGGCCCGCTGCG
Internal bar code:ACTGAGGCCGTAGTTTGATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1889
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCGCATGTCTAGCAAAG
Suggested primer 2:TGGCACATGACCAGGGAATC