Insertion junction: CLIP2.010419_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010419
Chromosome:chromosome 2
Location:6710380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387356 (1 of 10) PTHR12270//PTHR12270:SF6 - GLYCOSYLTRANSFERASE-RELATED // GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACGTTTTGCAGCGCCCTCGTTTACCTGCGTCACCAGCTCGATGTCAC
Internal bar code:TATGTACGTGTACAGCGTCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:404
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTTGTGTTGACGCATG
Suggested primer 2:GAAATGGCTGTGGTGGCAAG