Insertion junction: CLIP2.010430_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010430
Chromosome:chromosome 5
Location:1556627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234666 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGCCCTGGACACCCCTGAGACGAAGACCCAGTTGCCCCCCTTCTGA
Internal bar code:TTGCTGGAAGTCTGGTTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5377
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGGTGCATGGCAAGAAA
Suggested primer 2:TCTAGGACTCCTTTCGGGGG