Insertion junction: CLIP2.010435_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010435
Chromosome:chromosome 2
Location:5833740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117250 (1 of 5) 3.2.1.23 - Beta-galactosidase / Lactase 3'UTR
Cre02.g800244 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGGGGGCCCCATGCATGGGGGCTCCATGCCATCTCGCAATGGGATG
Internal bar code:TGTATAGCACGGGTTGGAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1826
LEAP-Seq percent confirming:77.0115
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGACCTTCGCAGGGAGAT
Suggested primer 2:CTGTGCGATGTGCTATGTGC