Insertion junction: CLIP2.010445_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010445
Chromosome:chromosome 7
Location:5103427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348040 (1 of 4) PTHR11785//PTHR11785:SF367 - AMINO ACID TRANSPORTER // AMINO-ACID PERMEASE BAT1; Probable amino acid/metabolite permease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAATTCGTTGGGCTCGGGCACATAACCCTCCCTCCCGCCTCCCCCTCAC
Internal bar code:AACGATACACTGTTCGGTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:680
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCACCTTGGTCCTCTC
Suggested primer 2:TTCGTCTACGTGCTTGTGCT