Insertion junction: CLIP2.010449_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010449
Chromosome:chromosome 7
Location:2620410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330300 (1 of 2) K14411 - RNA-binding protein Musashi (MSI) CDS
lncRNA_TCONS_00074821 CDS
lncRNA_TCONS_00075115 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCTTCAACCTGCGGCAGCGAGCGAGCGCGGTGAGTGGAAGCTCGTGG
Internal bar code:GCTACAGTTGATTTCCTCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGAACGCCCAGTGAGTT
Suggested primer 2:CATTGGGTAGCTGCAGACCA