Insertion junction: CLIP2.010450_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010450
Chromosome:chromosome 1
Location:7881489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055436 (1 of 1) PF05458 - Cd27 binding protein (Siva) (Siva) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCATGGTGGTGCGGGTTGGGGGCGAGGTTGGGCTGGTGGGTTGGGTGT
Internal bar code:TGTCACTTAGAACCGAAGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCAACAGCGTGTCTAG
Suggested primer 2:GGCACTTGACTGACAGCTCT