Insertion junction: CLIP2.010456_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010456
Chromosome:chromosome 10
Location:6671759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466350 CDPK2,SNRK2H (1 of 1) PTHR24343:SF169 - SERINE/THREONINE-PROTEIN KINASE SRK2D-RELATED; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCAGAATTGGAGCGCCTGGTCGCCGGGCCAGGAGGCAGGGCACACCA
Internal bar code:TTCACGCCTGGCTTAGTTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2858
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACAAATTCGAGCCCGT
Suggested primer 2:GCTAGGCGTCAGAAACACCT