Insertion junction: CLIP2.010462_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010462
Chromosome:chromosome 7
Location:4436901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343300 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGCAGGGAGGGCGGCGCGTCGCACGCTAGCGCCACGGCGGATAGGTT
Internal bar code:TACCTAGGAGCTGCCAGCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:40.7407
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATACCATGTCACGCGCT
Suggested primer 2:ACCTGCTGATGGATGTGCTC