Insertion junction: CLIP2.010463_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010463
Chromosome:chromosome 1
Location:4588550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031650 CGLD12 Conserved in the Green Lineage and Diatoms; (1 of 2) PF05637 - galactosyl transferase GMA12/MNN10 family (Glyco_transf_34) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATTGCAACCATGGACCCGTGAGTGAAACGATGTGGTGGGCGGGCAGGC
Internal bar code:TATTAGACCTAATTTTGAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:917
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATCCTGAACAGACCCC
Suggested primer 2:GGGTAATGTGGGTGGATGCA