Insertion junction: CLIP2.010464_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010464
Chromosome:plastome
Location:29311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802278 2717059,rpl5,ChreCp016 50S ribosomal protein L5; (1 of 2) PF00673 - ribosomal L5P family C-terminus (Ribosomal_L5_C) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGATAAAATTGATCAAGTACGTGGTATGGATATTTCAATTGTAACAA
Internal bar code:GAGACCTTATTATTGTAAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGTGGACTTACCCAGA
Suggested primer 2:TCGGGGGATATGCTTTGCAA