Insertion junction: CLIP2.010465_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010465
Chromosome:chromosome 3
Location:281486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144424 (1 of 5) PTHR32467//PTHR32467:SF15 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGAGGAAGCTCCTGGCTCGGGTACTTGCCGCGCTGCATCTGCGGTAA
Internal bar code:CGTATGGCGGACCTGGGCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCTATGGAGTGGCAGCA
Suggested primer 2:GCCCCAAACGTCTGTTGTTC