Insertion junction: CLIP2.010469_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010469
Chromosome:chromosome 1
Location:4219997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028450 (1 of 1) PTHR30544//PTHR30544:SF2 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTCCTCCAACCTCACAGCCCCGCCCCGCCAGGCCCAGCCCGCCGCGT
Internal bar code:GAATTCTCTCAACGAGGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2367
LEAP-Seq percent confirming:99.2188
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:128

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCTCTGCTTTCACCTT
Suggested primer 2:ACCAGCTGCTCCACAATCTC