Insertion junction: CLIP2.010475_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010475
Chromosome:chromosome 9
Location:3536174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396475 (1 of 1) PTHR24202//PTHR24202:SF4//PTHR24202:SF52 - FAMILY NOT NAMED // E3 UBIQUITIN-PROTEIN LIGASE MIB2 // E3 UBIQUITIN-PROTEIN LIGASE MIB1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAGGTGCTGACCGAGCTGGCGGGCCGCATGGAGGCGGCGTTGAGCCG
Internal bar code:TCAGCCGGTATGGGGGTTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATGGAGGCGACATACAG
Suggested primer 2:CTACGGGACTGTATCGTGGC