Insertion junction: CLIP2.010478_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010478
Chromosome:chromosome 11
Location:222871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467554 (1 of 15) PF01694 - Rhomboid family (Rhomboid) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAAGCAATGACAGCCTTGACAGCATGGACCTTGACGGTGCGTGGCTG
Internal bar code:CATCTTCCTTACTGGCGGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:650
LEAP-Seq percent confirming:26.4706
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGAGTGGGGAGGTGGAT
Suggested primer 2:CCTGATAACGACGACCGGAG