Insertion junction: CLIP2.010485_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.010485
Chromosome:chromosome 12
Location:1656514
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g486600 MEX1 (1 of 1) PTHR34809//PTHR34809:SF1 - FAMILY NOT NAMED // MALTOSE EXCESS PROTEIN 1, CHLOROPLASTIC-RELATED; Maltose exporter-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCATGCCCGGTTCCATCGCAGGCAACACATTAATGTGCAGCCATTTC
Internal bar code:AGCGTCAGCAGCGGGTGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATCCCTTCCGCTTCCT
Suggested primer 2:CCGTAGCTTCACCACAACCT