Insertion junction: CLIP2.010485_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.010485
Chromosome:chromosome 14
Location:1219403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g615800 (1 of 3) PTHR31563:SF1 - ION CHANNEL POLLUX-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGCCATCGGGAGGGAGGAGTGCTACGCGTGAGTACTACAGTTCTGC
Internal bar code:TTTTCTTGGTGAAATCTACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTATAACTCCCGTGCGG
Suggested primer 2:AATGTGCAGCACTCCCTCTC