Insertion junction: CLIP2.010494_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010494
Chromosome:chromosome 2
Location:1722237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086076 (1 of 1) PTHR33524//PTHR33524:SF1 - FAMILY NOT NAMED // SET DOMAIN-CONTAINING PROTEIN 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCGCTGTCCCTAGCTTCCTCCATCAGGAGGTGAAGGCCAGACCTCCT
Internal bar code:TCTTGAGGTTTTTGGAGTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1113
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCACTCTCCCTTTGCG
Suggested primer 2:TGACCGTGTGTGTGTAAGGG