Insertion junction: CLIP2.010499_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010499
Chromosome:chromosome 15
Location:902556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640100 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAATCTGCTGTGCGCCATAGTCCAGGGCTGCCCCTTGGAGGTGTTGGA
Internal bar code:GTTTTTGCAAAAGAGCGTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1090
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACAGCTGACTCACTCG
Suggested primer 2:AGCGTCGTTTGCAGAACCTA