Insertion junction: CLIP2.010503_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010503
Chromosome:chromosome 2
Location:6315437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00131344
lncRNA_TCONS_00131345

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCGAAAGTCTCTCTCTCTCTCCGTCGCTATCTGAAACGTAAACGATG
Internal bar code:TGGCCCGAACTGTATCTCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5863
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGCGAGCTATGATTCC
Suggested primer 2:TAAGAACGCCGACTTGCCTT