Insertion junction: CLIP2.010504_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.010504
Chromosome:chromosome 3
Location:8894721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205249 (1 of 1) PTHR24115//PTHR24115:SF451 - FAMILY NOT NAMED // KINESIN-LIKE PROTEIN SUBITO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGTGGCTCCTGTTGTGTGTGATTGACATCTCCCCGGACACGCACATA
Internal bar code:ACAGCATCAGCGCAAACCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:613
LEAP-Seq percent confirming:22.5
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTACCGTATTGCTGCTG
Suggested primer 2:ACGAGAACCGCGTATACGAC