Insertion junction: CLIP2.010513_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010513
Chromosome:chromosome 2
Location:7921118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145550 (1 of 1) PTHR13144//PTHR13144:SF0 - TEX261 PROTEIN // PROTEIN TEX261 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAGTGTGTACGAGAGCACAAGGGAAGGAAACAGGCAGAAGAGCACATG
Internal bar code:TGAATCTTAAGACGTGGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1726
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGCTTTCGATTCGTTAC
Suggested primer 2:CAAGCTTTGTTGCCCCCTTC