Insertion junction: CLIP2.010516_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010516
Chromosome:chromosome 6
Location:3278902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277250 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTGCCGCATCACTAGTCCAACAATCCACGTAGGGGTTCCACTCCCAG
Internal bar code:GCTAGTGTGCATCTGTGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2193
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTTCCAGGTGGATGGCC
Suggested primer 2:TTCCCGTACACTGCTGACAC