Insertion junction: CLIP2.010521_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.010521
Chromosome:chromosome 10
Location:2469964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435750 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACATTCATGGGCAGGAGGGAACGCACCCCATCTCACATGCACACGCA
Internal bar code:ACTAGGAAAAGCAAAGCTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1279
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGGATGCACACACACAC
Suggested primer 2:GACCAGCTCCTGTTCGTTGA