Insertion junction: CLIP2.010522_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010522
Chromosome:chromosome 2
Location:7461373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392393 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTCGAGCGGTGACGCGGGGCCGTCTGGCAGCGGCGGCGCTCCGGCAG
Internal bar code:AGGAATGGGTCTATCGAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1526
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTTGATGCGTTGACCACC
Suggested primer 2:ATAAGGAGTCCGAGGCACCT