Insertion junction: CLIP2.010524_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010524
Chromosome:chromosome 9
Location:2652951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801019 (1 of 3) PF09763 - Exocyst complex component Sec3 (Sec3_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGATGTAGTTTGGGCTGGTGTCTACAATCCCATCCCTCCTCACACCCT
Internal bar code:TGCACAAGAAATCAACCCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:17.8571
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCTATGAGGGCGTCAG
Suggested primer 2:CACACGAAACCGAAACACCC