Insertion junction: CLIP2.010524_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010524
Chromosome:chromosome 17
Location:2615222
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802051 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCGGCGCCGCCTTCAAAGCGGCGCCGGCGCGCAGGTTGAGACCTGCC
Internal bar code:GGCGACCTATCAGCTCGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3431
LEAP-Seq percent confirming:97.5806
LEAP-Seq n confirming:121
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAATGCGAACCCTGTGT
Suggested primer 2:CGCCCTGTTTGCATGTTGAA