Insertion junction: CLIP2.010526_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010526
Chromosome:chromosome 12
Location:7956611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552851 OGT1 (1 of 1) PTHR23083//PTHR23083:SF397 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED; O-linked N-acetylglucosamine transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCACACCTCACGAGTACCACGCCGGCCCCTGACGCACTCCACCAATC
Internal bar code:CCCGATACAAATGTTACCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTGGAGACAGGGTGCAG
Suggested primer 2:GCGTATACTGAGCTGCCCAT