Insertion junction: CLIP2.010531_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010531
Chromosome:chromosome 7
Location:4582077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344150 (1 of 1) PTHR21314//PTHR21314:SF0 - UNCHARACTERIZED // UPF0553 PROTEIN C9ORF64 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACATGCAGTGGTCTGGTGGCGGTCTGGTGATGGACTGATGGCGGTCTG
Internal bar code:CTCTTGAGCTGTAGCATTCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACTGTTTCCTTACGGGA
Suggested primer 2:GGGGATGTTCTGGGTGAGTG