Insertion junction: CLIP2.010536_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010536
Chromosome:chromosome 13
Location:3767958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588750 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACTCCATCCGGAGCAGCCGCATCAGCCTCTGCTCGGCGGGCTCCGCT
Internal bar code:ACTAAAGTGATGCGCCTAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACAGCAGGCTCCTTCTA
Suggested primer 2:GCCGGGGTACTGTCAACTAG