Insertion junction: CLIP2.010537_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.010537
Chromosome:chromosome 6
Location:7873293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303650 (1 of 1) K15027 - translation initiation factor 2D (EIF2D) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATCTCGATGACTCTGGTGCTGGCGGGGATGGACCGCTCGGCCACACA
Internal bar code:TCTTCGTCGGGGTGCTGTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGCGGGGGTGTATTAG
Suggested primer 2:GTGTTGACCTGGTGACGGAT