Insertion junction: CLIP2.010540_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.010540
Chromosome:chromosome 6
Location:7047826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297516 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTATTCAGCTTCATGTCCATAAACCCACAACAGCAACCCATCCCTCGT
Internal bar code:CGATTCTTATAGAGTACATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1287
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCATGGTGGTCATCAGGT
Suggested primer 2:TGGTGCGGCTATTGACAACT