Insertion junction: CLIP2.010541_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010541
Chromosome:chromosome 11
Location:4157278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481375 (1 of 8) IPR000772 - Ricin B, lectin domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGCGTGCAAGCGCACCTGTGGGCCTTCTGCTGCAGCGCTGTGGGGGC
Internal bar code:CAAAGAACTGATAAGGGGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2048
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTAGTTGCCACGCACAAG
Suggested primer 2:GAGTGATGAGAGTACGCCGG