Insertion junction: CLIP2.010544_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.010544
Chromosome:chromosome 11
Location:1251730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467695 (1 of 39) IPR009003 - Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGTGTGGCGCCTGGTGGACAAGGGCGAAACCGTCGGCACGTGCTGCC
Internal bar code:GGCGAAAATGACTGGTGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2433
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGAAGGCAGCCACACTA
Suggested primer 2:CGTGTTGTCAGTGCACCTTG